Petri Myllymäki

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  1. Accepted/In press
  2. Proceedings of the Ninth Workshop on Information Theoretic Methods in Science and Engineering

    Rissanen, J. J. (ed.), Leppä-Aho, J. L. A. (ed.), Roos, T. T. (ed.) & Myllymäki, P. J. (ed.) 2016 Helsinki: University of Helsinki, Department of Computer Science. 47 p. (Series of Publications B; vol. B-2016-2)

    Publication: Book/anthologyD4 Published development or research report

  3. Duplicate Detection for Bayesian Network Structure Learning

    Jahnsson, N., Malone, B. & Myllymäki, P. Jan 2017 In : New Generation Computing. 35, 1, p. 47-67 21 p.

    Publication: Contribution to journalA1 Refereed journal article

  4. Hashing-Based Hybrid Duplicate Detection for Bayesian Network Structure Learning

    Jahnsson, N., Malone, B. & Myllymäki, P. 2015 p. 46-60 15 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  5. Proceedings of the Eighth Workshop on Information Theoretic Methods in Science and Engineering

    Rissanen, J. J. (ed.), Harremoës, P. (ed.), Forchhammer, S. (ed.), Roos, T. T. (ed.) & Myllymäki, P. J. (ed.) 2015 Helsinki: University of Helsinki, Department of Computer Science. 53 p. (Series of Publications B; vol. B-2015-1)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  6. Inferring intra-motif dependencies of DNA binding sites from ChIP-seq data

    Eggeling, R., Roos, T., Myllymäki, P. & Grosse, I. 9 Nov 2015 In : BMC Bioinformatics. 16, 15 p., 375

    Publication: Contribution to journalA1 Refereed journal article

  7. SciNet: Interactive Intent Modeling for Information Discovery

    Ruotsalo, T., Peltonen, J., Eugster, M. J. A., Glowacka, D., Reijonen, A., Jacucci, G., Myllymäki, P. & Kaski, S. 2015 p. 1043-1044 2 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  8. Impact of Learning Strategies on the Quality of Bayesian Networks: An Empirical Evaluation

    Malone, B., Järvisalo, M. J. & Myllymäki, P. 2015 p. 562-571 10 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  9. Proceedings of the Seventh Workshop on Information Theoretic Methods in Science and Engineering

    Rissanen, J. J. (ed.), Myllymäki, P. J. (ed.), Roos, T. T. (ed.) & Santhanam, N. P. (ed.) 2014 Helsinki: University of Helsinki, Department of Computer Science. 34 p. (Series of Publications B; vol. B-2014-4)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  10. Passive Localization of a Robot Using Multiple-View Geometry

    Khoramshahi, E., Honkavaara, E., Hyyppä, J. & Myllymäki, P. 2014 In : International Journal of Robotics Applications and Technologies . 2, 2, p. 20-36 17 p.

    Publication: Contribution to journalA1 Refereed journal article

  11. Intentradar: search user interface that anticipates user's search intents

    Ruotsalo, T., Peltonen, J., Eugster, M., Glowacka, D., Reijonen, A., Jacucci, G., Myllymäki, P. & Kaski, S. 2014 p. 455-458 4 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  12. Interactive intent modeling: Information discovery beyond search

    Ruotsalo, T., Jacucci, G., Myllymäki, P. & Kaski, S. Jan 2015 In : Communications of the ACM. 58, 1, p. 86-92 7 p.

    Publication: Contribution to journalA1 Refereed journal article

  13. [Proceedings of the] WITMSE2013, The Sixth Workshop on Information Theoretic Methods in Science and Engineering, 26-29 August, Tokyo, Japan

    Rissanen, J. (ed.), Myllymäki, P. (ed.), Roos, T. (ed.), Yamanishi, K. (ed.) & Tabus, I. (ed.) 2013 Tokyo: University of Tokyo. 95 p.

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  14. Probabilistic methods for location estimation in wireless networks

    Kontkanen, P., Myllymaki, P., Roos, T., Tirri, H., Valtonen, K. & Wettig, H. 2005 Emerging Location Aware Broadband Wireless Ad Hoc Networks. Ganesh, R., Kota, S. L., Pahlavan, K. & Agusti, R. (eds.). Springer Science+Business Media, p. 173-185 13 p.

    Publication: Contribution to book/anthologyA3 Contribution to book/other compilations (refereed)

  15. Optimal Neighborhood Preserving Visualization by Maximum Satisfiability

    Bunte, K., Järvisalo, M., Berg, O., Myllymäki, P., Peltonen, J. & Kaski, S. 2014 p. 1694-1700 7 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  16. Predicting the Hardness of Learning Bayesian Networks

    Malone, B. M., Kangas, K., Järvisalo, M., Koivisto, M. & Myllymäki, P. 2014 p. 2460-2466 7 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  17. Robust learning of inhomogeneous PMMs

    Eggeling, R., Roos, T., Myllymäki, P. & Grosse, I. Apr 2014 p. 229-237 9 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  18. Non-Achievability of Asymptotic Minimax Regret without Knowledge of the Sample Size

    Watanabe, K., Roos, T. & Myllymäki, P. 2013

    Publication: Conference contributionB3 Unrefereed article in conference proceedings

  19. Achievability of Asymptotic Minimax Regret in Online and Batch Prediction

    Watanabe, K., Roos, T. & Myllymäki, P. Nov 2013 p. 181-193

    Publication: Conference contributionA4 Article in conference publication (refereed)

  20. Directing Exploratory Search with Interactive Intent Modeling

    Ruotsalo, T., Jaakko, P., Eugster, M. J. A., Glowacka, D., Konyushkova, K., Athukorala, K., Kosunen, I., Reijonen, A., Myllymäki, P., Jacucci, G. & Kaski, S. 2013 p. 1759-1764 6 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  21. Long-term effects of ubiquitous surveillance in the home

    Oulasvirta, A., Pihlajamaa, A., Perkiö, J. P., Ray, D., Vähäkangas, T., Hasu, T., Vainio, N. & Myllymäki, P. 2012 p. 41-50 10 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  22. Editorial: Special issue on the Fifth European Workshop on Probabilistic Graphical Models (PGM-2010)

    Roos, T. (ed.), Myllymäki, P. (ed.) & Jaakkola, T. (ed.) Dec 2012 In : International Journal of Approximate Reasoning. 59, 9, p. 1303–1304 2 p.

    Publication: Contribution to journalB1 Unrefereed journal article

  23. Comparison of NML and Bayesian scoring criteria for learning parsimonious Markov models

    Eggeling, R., Roos, T. T., Myllymäki, P. & Grosse, I. 2012 4 p.

    Publication: Conference contributionB3 Unrefereed article in conference proceedings

  24. Proceedings of the Fifth Workshop on Information Theoretic Methods in Science and Engineering (WITMSE-2012)

    de Rooij, S. (ed.), Kotlowski, W. (ed.), Rissanen, J. (ed.), Myllymäki, P. (ed.), Roos, T. (ed.) & Yamanishi, K. (ed.) 2012 Amsterdam: Centrum Wiskunde & Informatica (CWI). 91 p.

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  25. Ma$$iv€ - An Intelligent Mobile Grocery Assistant

    Bhattacharya, S., Floréen, P., Forsblom, A., Hemminki, S., Myllymäki, P., Nurmi, P., Pulkkinen, T. & Salovaara, A. 27 Jun 2012 p. 165-172

    Publication: Conference contributionA4 Article in conference publication (refereed)

  26. Calculating the normalized maximum likelihood distribution for Bayesian forests

    Wettig, J., Kontkanen, P. & Myllymäki, P. 2007 In : IADIS International Journal on Computer Science and Information Systems. 2, 2, p. 1-12 12 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  27. Fourth Workshop on Information Theoretic Methods in Science and Engineering: Proceedings

    Rissanen, J. (ed.), Myllymäki, P. (ed.), Roos, T. (ed.), Tabus, I. (ed.) & Yamanishi, K. (ed.) 2011 Helsinki. 83 p. (Department of Computer Science, Series of Publications C; no. C-2011-45)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  28. Discriminative learning of Bayesian networks via factorized conditional log-likelihood

    Carvalho, A. M., Roos, T. T., Oliveira, A. L. & Myllymäki, P. 2011 In : Journal of Machine Learning Research. 12, p. 2181-2210 30 p.

    Publication: Contribution to journalA1 Refereed journal article

  29. Semi-supervised learning for WLAN positioning

    Pulkkinen, T., Roos, T. T. & Myllymäki, P. 2011 p. 355-362 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  30. Compression-based stemmatology: A study of the legend of St. Henry of Finland

    Roos, T. T., Heikkilä, T., Cilibrasi, R. & Myllymäki, P. 2005 20 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  31. VISCI virtual intelligent space for collaborative innovation: project description

    Kumpulainen, K., Myllymäki, P., Smeds, R., Kronqvist, J. & Pöyry-Lassila, P. 2009 p. 75-82 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  32. Information-theoretically optimal histogram density estimation

    Kontkanen, P. & Myllymäki, P. 2006 Espoo: Helsinki Institute for Information Technology HIIT. 10 p. (HIIT Technical Reports; vol. 2006, no. 2006-2)

    Publication: Book/anthologyD4 Published development or research report

  33. Computing the regret table for multinomial data

    Kontkanen, P. & Myllymäki, P. 2005 (HIIT Technical Reports; vol. 2005, no. 2005-1)

    Publication: Book/anthologyD4 Published development or research report

  34. Analyzing the stochastic complexity via tree polynomials

    Kontkanen, P. & Myllymäki, P. 2005 10 p. (HIIT Technical Reports 2005-4)

    Publication: Book/anthologyD4 Published development or research report

  35. Image similarity: from syntax to weak semantics using multimodal features with application to multimedia retrieval

    Perkiö, J., Tuominen, A. & Myllymäki, P. 2009 p. 213-219 7 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  36. On the behavior of MDL denoising

    Roos, T., Myllymäki, P. & Tirri, H. 2005 p. 309-316 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  37. A Compression-Based Method for Stemmatic Analysis

    Roos, T. T., Heikkilä, T. & Myllymäki, P. 2006 p. 805-806 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  38. Sequence-based positioning technique

    Misikangas, P. & Myllymäki, P. 23 Jun 2005 H04M11/04 25 Mar 2008

    Publication: PatentH1 Patents

  39. Probabilistic model for a positioning technique

    Misikangas, P. & Myllymäki, P. 24 May 2007 G01S 3/02 (20060101); H04Q 7/20 (20060101) 27 Mar 2007

    Publication: PatentH1 Patents

  40. Image Similarity: From Syntax to Weak Semantics

    Perkiö, J., Tuominen, A., Vähäkangas, T. & Myllymäki, P. 2010 In : Multimedia Tools and Applications.

    Publication: Contribution to journalA1 Refereed journal article

  41. Proceedings of the Third Workshop on Information Theoretic Methods in Science and Engineering, August 16-18, 2010, Tampere, Finland

    Yamanishi, K. (ed.), Kontoyiannis, I. (ed.), Liski, E. P. (ed.), Myllymäki, P. (ed.), Rissanen, J. J. (ed.) & Tabus, I. (ed.) 2010 Tampere International Center for Signal Processing. (Tampere International Center for Signal Processing. TICSP series; no. 55)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  42. Proceedings of the Fifth European Workshop on Probabilistic Graphical Models

    Myllymäki, P., Roos, T. & Jaakkola, T. Sep 2010 Helsinki: Helsinki Institute for Information Technology HIIT. 302 p. (HIIT Publications; no. 2010-2)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  43. Learning locally minimax optimal Bayesian networks

    Silander, T., Roos, T. T. & Myllymäki, P. 2010 In : International Journal of Approximate Reasoning. 51/2010, 5, p. 544-557 14 p.

    Publication: Contribution to journalA1 Refereed journal article

  44. Model selection by sequentially normalized least squares

    Rissanen, J., Roos, T. & Myllymaki, P. 2010 In : Journal of Multivariate Analysis. 101, p. 839-849 11 p.

    Publication: Contribution to journalA1 Refereed journal article

  45. MDL-based attribute models in naive Bayes classification

    Elovaara, E. & Myllymäki, P. 2009

    Publication: Conference contributionA4 Article in conference publication (refereed)

  46. A framework for MDL clustering

    Myllymäki, P. 2009

    Publication: Conference contributionA4 Article in conference publication (refereed)

  47. Proceedings of the Second Workshop on Information Theoretic Methods in Science and Engineering, August 17-19, 2009, Tampere, Finland

    Heikkonen, J. (ed.), Kontoyiannis, I. (ed.), Liski, E. P. (ed.), Myllymäki, P. (ed.), Rissanen, J. (ed.) & Tabus, I. (ed.) 2009 Tampere: Tampere International Center for Signal Processing. (Tampere International Center for Signal Processing. TICSP series; no. 49)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  48. Locally minimax optimal predictive modeling with Bayesian networks

    Silander, T., Roos, T. & Myllymäki, P. 2009 p. 504-511 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  49. Magrathea: building and analyzing ubiquitous and social systems

    Perkiö, J. & Myllymäki, P. 2009 p. 66-75 10 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  50. MDL denoising revisited

    Roos, T., Myllymäki, P. & Rissanen, J. 2009 In : IEEE Transactions on Signal Processing. 57, 9, p. 3347-3360 14 p.

    Publication: Contribution to journalA1 Refereed journal article

  51. On recurrence formulas for computing the stochastic complexity

    Mononen, T. & Myllymäki, P. 2008 p. 281-286 6 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  52. Factorized NML models

    Myllymäki, P., Roos, T., Silander, T., Kontkanen, P. & Tirri, H. 2008 Festschrift in honor of Jorma Rissanen on the occasion of his 75th birthday. Tampere: Tampere International Center for Signal Processing, p. 189-204 16 p.

    Publication: Contribution to book/anthologyA3 Contribution to book/other compilations (refereed)

  53. Festschrift in honor of Jorma Rissanen on the occasion of his 75th birthday

    Grunwald, P. (ed.), Myllymäki, P. (ed.), Tabus, I. (ed.), Weinberger, M. (ed.) & Yu, B. (ed.) 2008 Tampere: Tampere International Center for Signal Processing. 320 p. (TICSP series; no. 38)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  54. Bayesian network structure learning using factorized NML universal models

    Roos, T., Silander, T., Kontkanen, P. & Myllymäki, P. 2008 p. 272-276 5 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  55. Computing the NML for Bayesian forests via matrices and generating polynomials

    Mononen, T. & Myllymäki, P. 2008 p. 276-280 5 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  56. Magrathea: a mobile agent- and sensing platform

    Perkiö, J., Myllymäki, P., Tuulos, V. H. & Boda, P. 2008 7 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  57. Uncertainty in Artificial Intelligence: proceedings of the Twenty-Fourth Conference (2008), July 9-12, 2008, Helsinki, Finland

    McAllester, D. (ed.) & Myllymäki, P. (ed.) 2008 Corvallis, Or: AUAI Press. 613 p.

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  58. On the multinomial stochastic complexity and its connection to the birthday problem

    Mononen, T. & Myllymäki, P. 2008 p. 17-22 6 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  59. Recent advances in computing the NML for discrete Bayesian networks

    Myllymäki, P. 2008

    Publication: Conference contributionA4 Article in conference publication (refereed)

  60. Proceedings of the First Workshop on Information Theoretic Methods in Science and Engineering, August 18-20, 2008, Tampere, Finland

    Heikkonen, J. (ed.), Kontoyiannis, I. (ed.), Liski, E. P. (ed.), Myllymäki, P. (ed.), Rissanen, J. (ed.) & Tabus, I. (ed.) 2008 Tampere: Tampere International Center for Signal Processing. (Tampere International Center for Signal Processing. TICSP series; no. 43)

    Publication: Book/anthologyC2 Edited book, compilation, conference proceeding or special issue of journal

  61. Computing the multinomial stochastic complexity in sub-linear time

    Mononen, T. & Myllymäki, P. 2008 p. 209-216 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  62. Factorized normalized maximum likelihood criterion for learning Bayesian network structures

    Silander, T., Roos, T., Kontkanen, P. & Myllymäki, P. 2008 p. 257-272 16 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  63. A Bayesian approach to learning in fault isolation

    Pernestål, A., Wettig, H., Silander, T., Nyberg, M. & Myllymäki, P. 2008 p. 143-150 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  64. Information theoretic methods for bioinformatics

    Rissanen, J., Grunwald, P., Heikkonen, J., Myllymäki, P., Roos, T. & Rousu, J. 2007 In : EURASIP Journal on Bioinformatics and Systems Biology. 2007, Article ID 79128, 2 p.

    Publication: Contribution to journalA1 Refereed journal article

  65. MDL histogram density estimation

    Kontkanen, P. & Myllymäki, P. 2007

    Publication: Conference contributionA4 Article in conference publication (refereed)

  66. A linear-time algorithm for computing the multinomial stochastic complexity

    Kontkanen, P. & Myllymäki, P. 2007 In : Information Processing Letters. 103, 6, p. 227-233 7 p.

    Publication: Contribution to journalA1 Refereed journal article

  67. NML computation algorithms for tree-structured multinomial Bayesian networks

    Kontkanen, P., Wettig, H. & Myllymäki, P. 2007 In : EURASIP Journal on Bioinformatics and Systems Biology. 2007, p. Article ID 90947 11 p.

    Publication: Contribution to journalA1 Refereed journal article

  68. On sensitivity of the MAP Bayesian network structure to the equivalent sample size parameter

    Silander, T., Kontkanen, P. & Myllymäki, P. 2007 p. 360-367 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  69. Calculating the normalized maximum likelihood distribution for Bayesian forests

    Wettig, H., Kontkanen, P. & Myllymäki, P. 2007

    Publication: Conference contributionA4 Article in conference publication (refereed)

  70. Fast NML computation for naive Bayes models

    Mononen, T. & Myllymäki, P. 2007 p. 151-160 10 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  71. Generalization to unseen cases

    Roos, T., Myllymäki, P., Grunwald, P. & Tirri, H. 2006 p. 1129-1136 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  72. P-Course: medical applications of Bayesian classification with informative priors

    Lahtinen, J., Myllymäki, P. & Ryynänen, O-P. 2006 p. 38-40 3 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  73. A simple approach for finding the globally optimal Bayesian network structure

    Silander, T. & Myllymäki, P. 2006 p. 445-452 8 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  74. Sairaalaan lähettämisen arviointi Bayesin verkkomallilla

    Ryynänen, O-P., Puhakka, M., Myllymäki, P., Palomäki, P., Anttonen, V., Jukola, R. & Takala, J. 2006 In : Suomen lääkärilehti. 61, 51, p. 5353-5358 6 p.

    Publication: Contribution to journalA1 Refereed journal article

  75. A fast normalized maximum likelihood algorithm for multinomial data

    Kontkanen, P. & Myllymäki, P. 2005 p. 1613-1615 3 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  76. On discriminative Bayesian network classifiers and logistic regression

    Roos, T., Wettig, H., Grunwald, P., Myllymäki, P. & Tirri, H. 2005 In : Machine Learning. 59, 3, p. 267-296 30 p.

    Publication: Contribution to journalA1 Refereed journal article

  77. User models from implicit feedback for proactive information retrieval

    Kaski, S., Myllymäki, P. & Kojo, I. 2005 p. 25-26 2 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  78. A testbed for proactive information retrieval

    Miettinen, M., Tuulos, V. & Myllymäki, P. 2005 p. 137-146 10 p.

    Publication: Conference contributionA4 Article in conference publication (refereed)

  79. An MDL framework for data clustering

    Kontkanen, P., Myllymäki, P., Buntine, W., Rissanen, J. & Tirri, H. 2005 Advances in minimum description length. Cambridge (Mass.): MIT Press, p. 323-353 31 p.

    Publication: Contribution to book/anthologyA3 Contribution to book/other compilations (refereed)